image_info
Small utility module to extract some information from an image. You need to specify the info you want to extract as an argument, and the module will return the requested information in a text file.
Keywords : image, info, datatype
Inputs
Section titled “Inputs”Input 1
Section titled “Input 1”Format : tuple val(meta), path(image)
| Type | Description | Mandatory | Pattern | |
|---|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ] | True | |
| image | file | Image to extract information from. | True | *.nii.gz |
Outputs
Section titled “Outputs”property
Section titled “property”Format : val(meta)
| Type | Description | Mandatory | Pattern | |
|---|---|---|---|---|
| meta | map | Groovy Map containing sample information e.g. [ id:'sample1', single_end:false ]# txt format | True |
versions
Section titled “versions”Format : path(versions.yml)
| Type | Description | Mandatory | Pattern | |
|---|---|---|---|---|
| versions.yml | file | File containing software versions | True | versions.yml |
Arguments (see process.ext)
Section titled “Arguments (see process.ext)”| Type | Description | Default | Choices | |
|---|---|---|---|---|
| property | string | Key to extract from the image. | all | - all - name - format - ndim - size - spacing - datatype - strides - offset - multiplier - transform |
| Description | DOI | |
|---|---|---|
| MRtrix3 | MRtrix3 is a software package for various types of diffusion imaging data, including diffusion-weighted, diffusion-tensor, and q-ball imaging. | 10.1016/j.neuroimage.2019.116137 |
Authors
Section titled “Authors”Last updated : 2026-05-12